[Strategy Market] Combo Test

Combines elements of Basic Test, Berex Test, Clean Plot with emphasis on paired/closing/unpaired ratio distinctions

Free energy = –1.5 * number of pairs [e.g. 48 kcal if there are 32 pairs]
Melting point between 87 and 107°C, penalize -5 for each 10 above or below

Unpaired bases: 15%, 5%, 5% for G,C,U percentages
Stack Closing bases: 35%, 15%, 10% for C,U,A percentages
Other Paired bases: 25%, 20%, 25% for G,C,A percentages

plot_score = (number of white cells in the upper triangle of the pairwise probabilities plot) / (total number of cells in the upper triangle of the pairwise probabilities plot)

Dear jandersonlee,

Your strategy has been added to our implementation queue with task id 145. You can check the schedule of the implementation here.

Thanks for sharing your idea!

EteRNA team