[Strategy Market] [Switch] FMN1 versus FMN2

Strategy for MS2/FMN labs

Turnoff labs

  • Give +2 for each base, if the FMN sequence involved in the switching is the one closest to the MS2 sequence

  • Give +4 for each base, if the FMN sequence involved in the switching is the FMN1 bit.

  • Give +2 for each of the twin G’s in the FMN sequence, which pairs up with a C base in the MS2 turnoff sequence.

  • Give +1 for each U base in the MS2 turnoff base that is paired with an A base base in the FMN sequence.

Turnon labs

  • Give +2 if FMN1 is targeted

  • Give +1 if FMN2 is targeted

  • Give +4 if both FMN1 and FMN2 is targeted

  • Give +1 if aptamer gate (the moving end) is involved in the switch with MS2.

  • Give +2 for each MS2 base that pairs up with FMN1 and FMN2

  • Give +1 for each MS2 base that pairs with an aptamer gate base. (The aptamer gate being around 4-5 basepairs long)

Background article

https://getsatisfaction.com/eternagame/topics/switch-scores-for-eterna-switch-puzzles?topic-reply-list%5Bsettings%5D%5Bfilter_by%5D=all&topic-reply-list%5Bsettings%5D%5Breply_id%5D=15895592#reply_15895592

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