[Strategy Market] Terminal Mismatch

Identify each terminal mismatch in the structure, and award points as follows:

External Loops and Multiloops:
1 point for AA
0 points for all others

Internal Loops other than 1-1, 2-1, or 2-2:
2 points for GA or AA
1 point for UU
0 points for all others

Hairpins:
2 points for AA or GA when G is 5’ of A
1 point for UU
0 points for all others

Score = 100 * (Evaluated Score / Maximum Possible Score)

Dear Quasispecies,

Your strategy has been added to our implementation queue with task id 129. You can check the schedule of the implementation here.

Thanks for sharing your idea!

EteRNA team